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1.
PLoS One ; 19(5): e0302692, 2024.
Article in English | MEDLINE | ID: mdl-38722893

ABSTRACT

Tobacco vein necrosis (TVN) is a complex phenomenon regulated by different genetic determinants mapped in the HC-Pro protein (amino acids N330, K391 and E410) and in two regions of potato virus Y (PVY) genome, corresponding to the cytoplasmic inclusion (CI) protein and the nuclear inclusion protein a-protease (NIa-Pro), respectively. A new determinant of TVN was discovered in the MK isolate of PVY which, although carried the HC-Pro determinants associated to TVN, did not induce TVN. The HC-Pro open reading frame (ORF) of the necrotic infectious clone PVY N605 was replaced with that of the non-necrotic MK isolate, which differed only by one amino acid at position 392 (T392 instead of I392). The cDNA clone N605_MKHCPro inoculated in tobacco induced only weak mosaics at the systemic level, demostrating that the amino acid at position 392 is a new determinant for TVN. No significant difference in accumulation in tobacco was observed between N605 and N605_MKHCPro. Since phylogenetic analyses showed that the loss of necrosis in tobacco has occurred several times independently during PVY evolution, these repeated evolutions strongly suggest that tobacco necrosis is a costly trait in PVY.


Subject(s)
Nicotiana , Phylogeny , Plant Diseases , Point Mutation , Potyvirus , Viral Proteins , Nicotiana/virology , Potyvirus/genetics , Potyvirus/pathogenicity , Plant Diseases/virology , Viral Proteins/genetics , Viral Proteins/metabolism , Cysteine Endopeptidases/genetics , Cysteine Endopeptidases/metabolism , Amino Acid Sequence , Necrosis , Molecular Sequence Data , Open Reading Frames/genetics
2.
Proc Natl Acad Sci U S A ; 121(21): e2401748121, 2024 May 21.
Article in English | MEDLINE | ID: mdl-38739789

ABSTRACT

Potyviridae, the largest family of plant RNA viruses, includes many important pathogens that significantly reduce the yields of many crops worldwide. In this study, we report that the 6-kilodalton peptide 1 (6K1), one of the least characterized potyviral proteins, is an endoplasmic reticulum-localized protein. AI-assisted structure modeling and biochemical assays suggest that 6K1 forms pentamers with a central hydrophobic tunnel, can increase the cell membrane permeability of Escherichia coli and Nicotiana benthamiana, and can conduct potassium in Saccharomyces cerevisiae. An infectivity assay showed that viral proliferation is inhibited by mutations that affect 6K1 multimerization. Moreover, the 6K1 or its homologous 7K proteins from other viruses of the Potyviridae family also have the ability to increase cell membrane permeability and transmembrane potassium conductance. Taken together, these data reveal that 6K1 and its homologous 7K proteins function as viroporins in viral infected cells.


Subject(s)
Nicotiana , Nicotiana/virology , Nicotiana/metabolism , Potyviridae/genetics , Potyviridae/metabolism , Viral Proteins/metabolism , Viral Proteins/genetics , Cell Membrane Permeability , Endoplasmic Reticulum/metabolism , Endoplasmic Reticulum/virology , Saccharomyces cerevisiae/genetics , Saccharomyces cerevisiae/metabolism , Viroporin Proteins/metabolism , Viroporin Proteins/genetics , Escherichia coli/genetics , Escherichia coli/metabolism , Plant Viruses/genetics , Plant Viruses/physiology , Plant Diseases/virology , Potassium/metabolism
3.
Virus Res ; 344: 199369, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38608732

ABSTRACT

Tobacco (Nicotiana tabacum) is one of the major cash crops in China. Potato virus Y (PVY), a representative member of the genus Potyvirus, greatly reduces the quality and yield of tobacco leaves by inducing veinal necrosis. Mild strain-mediated cross-protection is an attractive method of controlling diseases caused by PVY. Currently, there is a lack of effective and stable attenuated PVY mutants. Potyviral helper component-protease (HC-Pro) is a likely target for the development of mild strains. Our previous studies showed that the residues lysine at positions 124 and 182 (K124 and K182) in HC-Pro were involved in PVY virulence, and the conserved KITC motif in HC-Pro was involved in aphid transmission. In this study, to improve the stability of PVY mild strains, K at position 50 (K50) in KITC motif, K124, and K182 were separately substituted with glutamic acid (E), leucine (L), and arginine (R), resulting in a triple-mutant PVY-HCELR. The mutant PVY-HCELR had attenuated virulence and did not induce leaf veinal necrosis symptoms in tobacco plants and could not be transmitted by Myzus persicae. Furthermore, PVY-HCELR mutant was genetically stable after six serial passages, and only caused mild mosaic symptoms in tobacco plants even at 90 days post inoculation. The tobacco plants cross-protected by PVY-HCELR mutant showed high resistance to the wild-type PVY. This study showed that PVY-HCELR mutant was a promising mild mutant for cross-protection to control PVY.


Subject(s)
Cross Protection , Mutation , Nicotiana , Plant Diseases , Potyvirus , Viral Proteins , Potyvirus/genetics , Potyvirus/pathogenicity , Potyvirus/enzymology , Nicotiana/virology , Plant Diseases/virology , Viral Proteins/genetics , Viral Proteins/metabolism , Virulence , Animals , Aphids/virology , Cysteine Endopeptidases/genetics , Cysteine Endopeptidases/metabolism , Plant Leaves/virology , China
4.
Pestic Biochem Physiol ; 201: 105893, 2024 May.
Article in English | MEDLINE | ID: mdl-38685255

ABSTRACT

Potato virus Y (PVY) is one of the most important pathogens in the genus Potyvirus that seriously harms agricultural production. Copper (Cu), as a micronutrient, is closely related to plant immune response. In this study, we found that foliar application of Cu could inhibit PVY infection to some extent, especially at 7 days post inoculation (dpi). To explore the effect of Cu on PVY infection, transcriptome sequencing analysis was performed on PVY-infected tobacco with or without Cu application. Several key pathways regulated by Cu were identified, including plant-pathogen interaction, inorganic ion transport and metabolism, and photosynthesis. Moreover, the results of virus-induced gene silencing (VIGS) assays revealed that NbMLP423, NbPIP2, NbFd and NbEXPA played positive roles in resistance to PVY infection in Nicotiana benthamiana. In addition, transgenic tobacco plants overexpressing NtEXPA11 showed increased resistance to PVY infection. These results contribute to clarify the role and regulatory mechanism of Cu against PVY infection, and provide candidate genes for disease resistance breeding.


Subject(s)
Copper , Disease Resistance , Nicotiana , Plant Diseases , Potyvirus , Nicotiana/virology , Nicotiana/genetics , Potyvirus/physiology , Copper/pharmacology , Plant Diseases/virology , Disease Resistance/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Gene Expression Profiling , Plants, Genetically Modified/virology , Gene Expression Regulation, Plant , Transcriptome
5.
Viruses ; 16(4)2024 Mar 22.
Article in English | MEDLINE | ID: mdl-38675832

ABSTRACT

Glycosylation, a dynamic modification prevalent in viruses and higher eukaryotes, is principally regulated by uridine diphosphate (UDP)-glycosyltransferases (UGTs) in plants. Although UGTs are involved in plant defense responses, their responses to most pathogens, especially plant viruses, remain unclear. Here, we aimed to identify UGTs in the whole genome of Nicotiana benthamiana (N. benthamiana) and to analyze their function in Chinese wheat mosaic virus (CWMV) infection. A total of 147 NbUGTs were identified in N. benthamiana. To conduct a phylogenetic analysis, the UGT protein sequences of N. benthamiana and Arabidopsis thaliana were aligned. The gene structure and conserved motifs of the UGTs were also analyzed. Additionally, the physicochemical properties and predictable subcellular localization were examined in detail. Analysis of cis-acting elements in the putative promoter revealed that NbUGTs were involved in temperature, defense, and hormone responses. The expression levels of 20 NbUGTs containing defense-related cis-acting elements were assessed in CWMV-infected N. benthamiana, revealing a significant upregulation of 8 NbUGTs. Subcellular localization analysis of three NbUGTs (NbUGT12, NbUGT16 and NbUGT17) revealed their predominant localization in the cytoplasm of N. benthamiana leaves, and NbUGT12 was also distributed in the chloroplasts. CWMV infection did not alter the subcellular localization of NbUGT12, NbUGT16, and NbUGT17. Transient overexpression of NbUGT12, NbUGT16, and NbUGT17 enhanced CWMV infection, whereas the knockdown of NbUGT12, NbUGT16 and NbUGT17 inhibited CWMV infection in N. benthamiana. These NbUGTs could serve as potential susceptibility genes to facilitate CWMV infection. Overall, the findings throw light on the evolution and function of NbUGTs.


Subject(s)
Disease Resistance , Gene Expression Regulation, Plant , Glycosyltransferases , Nicotiana , Phylogeny , Plant Diseases , Plant Proteins , Nicotiana/virology , Nicotiana/genetics , Plant Diseases/virology , Plant Diseases/genetics , Glycosyltransferases/genetics , Glycosyltransferases/metabolism , Disease Resistance/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Genome, Plant , Uridine Diphosphate/metabolism , Potyvirus/genetics , Potyvirus/physiology , Genome-Wide Association Study
6.
PLoS Pathog ; 20(4): e1012174, 2024 Apr.
Article in English | MEDLINE | ID: mdl-38630801

ABSTRACT

As a type of parasitic agent, satellite RNAs (satRNAs) rely on cognate helper viruses to achieve their replication and transmission. During the infection of satRNAs, helper virus RNAs serve as templates for synthesizing viral proteins, including the replication proteins essential for satRNA replication. However, the role of non-template functions of helper virus RNAs in satRNA replication remains unexploited. Here we employed the well-studied model that is composed of cucumber mosaic virus (CMV) and its associated satRNA. In the experiments employing the CMV trans-replication system, we observed an unexpected phenomenon the replication proteins of the mild strain LS-CMV exhibited defective in supporting satRNA replication, unlike those of the severe strain Fny-CMV. Independent of translation products, all CMV genomic RNAs could enhance satRNA replication, when combined with the replication proteins of CMV. This enhancement is contingent upon the recruitment and complete replication of helper virus RNAs. Using the method developed for analyzing the satRNA recruitment, we observed a markedly distinct ability of the replication proteins from both CMV strains to recruit the positive-sense satRNA-harboring RNA3 mutant for replication. This is in agreement with the differential ability of both 1a proteins in binding satRNAs in plants. The discrepancies provide a convincing explanation for the variation of the replication proteins of both CMV strains in replicating satRNAs. Taken together, our work provides compelling evidence that the non-template functions of helper virus RNAs create an optimal replication environment to enhance satRNA proliferation.


Subject(s)
Cucumovirus , Helper Viruses , RNA, Satellite , RNA, Viral , Virus Replication , Helper Viruses/genetics , Helper Viruses/physiology , Cucumovirus/genetics , Cucumovirus/metabolism , Cucumovirus/physiology , RNA, Satellite/metabolism , RNA, Satellite/genetics , RNA, Viral/genetics , RNA, Viral/metabolism , Plant Diseases/virology , Nicotiana/virology , Nicotiana/metabolism , Nicotiana/genetics , Viral Proteins/metabolism , Viral Proteins/genetics
7.
BMC Biotechnol ; 24(1): 21, 2024 Apr 24.
Article in English | MEDLINE | ID: mdl-38658899

ABSTRACT

BACKGROUND: Since the 2000's, plants have been used as bioreactors for the transient production of molecules of interest such as vaccines. To improve protein yield, "amplicon" vectors based on plant viruses are used. These viral constructs, engineered to carry the gene of interest replicate strongly once introduced into the plant cell, allowing significant accumulation of the protein. Here, we evaluated the suitability of the monocot-infecting RNA virus Rice yellow mottle virus (RYMV) as an amplicon vector. The promastigote surface antigen (PSA) of the protozoan Leishmania was considered as a protein of interest due to its vaccine properties against canine leishmaniasis. RESULTS: Since P1 (ORF1) and CP (ORF3) proteins are not strictly necessary for viral replication, ORF1 was deleted and the PSA gene was substituted to ORF3 in the RYMV-based vector. We evaluated its expression in the best described plant bioreactor system, Nicotiana benthamiana which, unlike rice, allows transient transformation by Agrobacterium. Despite not being its natural host, we demonstrated a low level of RYMV-based vector replication in N. benthamiana leaves. Under optimized ratio, we showed that the P19 silencing suppressor in combination with the missing viral CP ORF significantly enhanced RYMV amplicon replication in N. benthamiana. Under these optimized CP/P19 conditions, we showed that the RYMV amplicon replicated autonomously in the infiltrated N. benthamiana cells, but was unable to move out of the infiltrated zones. Finally, we showed that when the RYMV amplicon was expressed under the optimized conditions we set up, it allowed enhanced PSA protein accumulation in N. benthamiana compared to the PSA coding sequence driven by the 35S promoter without amplicon background. CONCLUSION: This work demonstrates that a non-dicot-infecting virus can be used as an amplicon vector for the efficient production of proteins of interest such as PSA in N. benthamiana leaves.


Subject(s)
Genetic Vectors , Nicotiana , Plant Leaves , Nicotiana/genetics , Nicotiana/virology , Genetic Vectors/genetics , Plant Leaves/virology , Animals , Dogs , Antigens, Protozoan/genetics , Antigens, Protozoan/immunology , Bioreactors , Plants, Genetically Modified/genetics
8.
PLoS Biol ; 22(4): e3002600, 2024 Apr.
Article in English | MEDLINE | ID: mdl-38662792

ABSTRACT

The signature feature of all plant viruses is the encoding of movement proteins (MPs) that supports the movement of the viral genome into adjacent cells and through the vascular system. The recent discovery of umbravirus-like viruses (ULVs), some of which only encode replication-associated proteins, suggested that they, as with umbraviruses that lack encoded capsid proteins (CPs) and silencing suppressors, would require association with a helper virus to complete an infection cycle. We examined the infection properties of 2 ULVs: citrus yellow vein associated virus 1 (CY1), which only encodes replication proteins, and closely related CY2 from hemp, which encodes an additional protein (ORF5CY2) that was assumed to be an MP. We report that both CY1 and CY2 can independently infect the model plant Nicotiana benthamiana in a phloem-limited fashion when delivered by agroinfiltration. Unlike encoded MPs, ORF5CY2 was dispensable for infection of CY2, but was associated with faster symptom development. Examination of ORF5CY2 revealed features more similar to luteoviruses/poleroviruses/sobemovirus CPs than to 30K class MPs, which all share a similar single jelly-roll domain. In addition, only CY2-infected plants contained virus-like particles (VLPs) associated with CY2 RNA and ORF5CY2. CY1 RNA and a defective (D)-RNA that arises during infection interacted with host protein phloem protein 2 (PP2) in vitro and in vivo, and formed a high molecular weight complex with sap proteins in vitro that was partially resistant to RNase treatment. When CY1 was used as a virus-induced gene silencing (VIGS) vector to target PP2 transcripts, CY1 accumulation was reduced in systemic leaves, supporting the usage of PP2 for systemic movement. ULVs are therefore the first plant viruses encoding replication and CPs but no MPs, and whose systemic movement relies on a host MP. This explains the lack of discernable helper viruses in many ULV-infected plants and evokes comparisons with the initial viruses transferred into plants that must have similarly required host proteins for movement.


Subject(s)
Nicotiana , Plant Diseases , Plant Viral Movement Proteins , Nicotiana/virology , Nicotiana/genetics , Nicotiana/metabolism , Plant Diseases/virology , Plant Viral Movement Proteins/metabolism , Plant Viral Movement Proteins/genetics , RNA Viruses/genetics , RNA Viruses/physiology , RNA Viruses/metabolism , Plant Viruses/physiology , Plant Viruses/genetics , Plant Viruses/metabolism , Plant Viruses/pathogenicity , Capsid Proteins/metabolism , Capsid Proteins/genetics , RNA, Viral/genetics , RNA, Viral/metabolism , Genome, Viral , Phloem/virology , Phloem/metabolism
9.
J Virol ; 97(10): e0112423, 2023 10 31.
Article in English | MEDLINE | ID: mdl-37792002

ABSTRACT

IMPORTANCE: Many plant proteins and some proteins from plant pathogens are dually targeted to chloroplasts and mitochondria, and are supposed to be transported along the general pathways for organellar protein import, but this issue has not been explored yet. Moreover, organellar translocon receptors exist as families of several members whose functional specialization in different cargos is supposed but not thoroughly studied. This article provides novel insights into such topics showing for the first time that an exogenous protein, the melon necrotic spot virus coat protein, exploits the common Toc/Tom import systems to enter both mitochondria and chloroplasts while identifying the involved specific receptors.


Subject(s)
Arabidopsis , Capsid Proteins , Chloroplasts , Mitochondria , Nicotiana , Plant Proteins , Receptors, Cell Surface , Arabidopsis/metabolism , Arabidopsis/virology , Capsid Proteins/metabolism , Carrier Proteins/metabolism , Chloroplasts/metabolism , Chloroplasts/virology , Mitochondria/metabolism , Mitochondria/virology , Nicotiana/metabolism , Nicotiana/virology , Plant Proteins/metabolism , Protein Transport , Receptors, Cell Surface/metabolism
10.
Nature ; 622(7981): 139-148, 2023 Oct.
Article in English | MEDLINE | ID: mdl-37704724

ABSTRACT

Aphids transmit viruses and are destructive crop pests1. Plants that have been attacked by aphids release volatile compounds to elicit airborne defence (AD) in neighbouring plants2-5. However, the mechanism underlying AD is unclear. Here we reveal that methyl-salicylate (MeSA), salicylic acid-binding protein-2 (SABP2), the transcription factor NAC2 and salicylic acid-carboxylmethyltransferase-1 (SAMT1) form a signalling circuit to mediate AD against aphids and viruses. Airborne MeSA is perceived and converted into salicylic acid by SABP2 in neighbouring plants. Salicylic acid then causes a signal transduction cascade to activate the NAC2-SAMT1 module for MeSA biosynthesis to induce plant anti-aphid immunity and reduce virus transmission. To counteract this, some aphid-transmitted viruses encode helicase-containing proteins to suppress AD by interacting with NAC2 to subcellularly relocalize and destabilize NAC2. As a consequence, plants become less repellent to aphids, and more suitable for aphid survival, infestation and viral transmission. Our findings uncover the mechanistic basis of AD and an aphid-virus co-evolutionary mutualism, demonstrating AD as a potential bioinspired strategy to control aphids and viruses.


Subject(s)
Air , Aphids , Plant Diseases , Plants , Salicylic Acid , Signal Transduction , Aphids/physiology , Aphids/virology , Host Microbial Interactions , Plant Diseases/immunology , Plant Diseases/parasitology , Plant Diseases/prevention & control , Plant Diseases/virology , Plant Proteins/metabolism , Plants/metabolism , Plants/parasitology , Plants/virology , Salicylic Acid/metabolism , Symbiosis , Nicotiana/immunology , Nicotiana/metabolism , Nicotiana/parasitology , Nicotiana/virology , Viral Proteins/metabolism , Animals
11.
J Virol ; 97(9): e0046323, 2023 09 28.
Article in English | MEDLINE | ID: mdl-37668368

ABSTRACT

Plant viruses induce various disease symptoms that substantially impact agriculture, but the underlying mechanisms of viral disease in plants are poorly understood. Kobu-sho is a disease in gentian that shows gall formation with ectopic development of lignified cells and vascular tissues such as xylem. Here, we show that a gene fragment of gentian Kobu-sho-associated virus, which is designated as Kobu-sho-inducing factor (KOBU), induces gall formation accompanied by ectopic development of lignified cells and xylem-like tissue in Nicotiana benthamiana. Transgenic gentian expressing KOBU exhibited tumorous symptoms, confirming the gall-forming activity of KOBU. Surprisingly, KOBU expression can also induce differentiation of an additional leaf-like tissue on the abaxial side of veins in normal N. benthamiana and gentian leaves. Transcriptome analysis with Arabidopsis thaliana expressing KOBU revealed that KOBU activates signaling pathways that regulate xylem development. KOBU protein forms granules and plate-like structures and co-localizes with mRNA splicing factors within the nucleus. Our findings suggest that KOBU is a novel pleiotropic virulence factor that stimulates vascular and leaf development. IMPORTANCE While various mechanisms determine disease symptoms in plants depending on virus-host combinations, the details of how plant viruses induce symptoms remain largely unknown in most plant species. Kobu-sho is a disease in gentian that shows gall formation with ectopic development of lignified cells and vascular tissues such as xylem. Our findings demonstrate that a gene fragment of gentian Kobu-sho-associated virus (GKaV), which is designated as Kobu-sho-inducing factor, induces the gall formation accompanied by the ectopic development of lignified cells and xylem-like tissue in Nicotiana benthamiana. The molecular mechanism by which gentian Kobu-sho-associated virus induces the Kobu-sho symptoms will provide new insight into not only plant-virus interactions but also the regulatory mechanisms underlying vascular and leaf development.


Subject(s)
Gentiana , Nicotiana , Plant Tumors , Plant Viruses , Virulence Factors , Xylem , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis/virology , Gene Expression Profiling , Gene Expression Regulation, Plant , Gentiana/virology , Plant Viruses/genetics , Plant Viruses/pathogenicity , Nicotiana/metabolism , Nicotiana/virology , Xylem/metabolism , Virulence Factors/genetics , Virulence Factors/metabolism , Plant Leaves , Plant Tumors/virology , Signal Transduction , RNA Splicing Factors
12.
Cells ; 12(4)2023 02 11.
Article in English | MEDLINE | ID: mdl-36831257

ABSTRACT

The ubiquitin-proteasome system (UPS) plays an important role in virus-host interactions. However, the mechanism by which the UPS is involved in innate immunity remains unclear. In this study, we identified a novel major latex protein-like protein 43 (NbMLP43) that conferred resistance to Nicotiana benthamiana against potato virus Y (PVY) infection. PVY infection strongly induced NbMLP43 transcription but decreased NbMLP43 at the protein level. We verified that B-box zinc finger protein 24 (NbBBX24) interacted directly with NbMLP43 and that NbBBX24, a light responsive factor, acted as an essential intermediate component targeting NbMLP43 for its ubiquitination and degradation via the UPS. PVY, tobacco mosaic virus, (TMV) and cucumber mosaic virus (CMV) infections could promote NbMLP43 ubiquitination and proteasomal degradation to enhance viral infection. Ubiquitination occurred at lysine 38 (K38) within NbMLP43, and non-ubiquitinated NbMLP43(K38R) conferred stronger resistance to RNA viruses. Overall, our results indicate that the novel NbMLP43 protein is a target of the UPS in the competition between defense and viral anti-defense and enriches existing theoretical studies on the use of UPS by viruses to promote infection.


Subject(s)
Nicotiana , Plant Diseases , Potyvirus , Proteasome Endopeptidase Complex/metabolism , Ubiquitin/metabolism , Ubiquitination , Nicotiana/virology , Plant Diseases/virology , Plant Proteins/metabolism , Potyvirus/pathogenicity
13.
Mol Plant Pathol ; 24(5): 425-435, 2023 05.
Article in English | MEDLINE | ID: mdl-36828802

ABSTRACT

Tomato chlorosis virus (ToCV) is a member of the genus Crinivirus in the family Closteroviridae. It has a wide host range and wide distribution, causing serious harm to the vegetable industry. The autophagy pathway plays an important role in plant resistance to virus infection. Viruses and plant hosts coevolve in defence and antidefence processes around autophagy. In this study, the interaction between ToCV p22 and Nicotiana benthamiana B-cell lymphoma2-associated athanogenes5 Nicotiana benthamiana (NbBAG5) was examined. Through overexpression and down-regulation of NbBAG5, results showed that NbBAG5 could negatively regulate ToCV infection. NbBAG5 was found to be localized in mitochondria and can change the original localization of ToCV p22, which is colocalized in mitochondria. NbBAG5 inhibited the expression of mitophagy-related genes and the number of autophagosomes, thereby regulating viral infection by affecting mitophagy. In summary, this study demonstrated that ToCV p22 affects autophagy by interacting with NbBAG5, established the association between viral infection, BAG proteins family, and the autophagy pathway, and explained the molecular mechanism by which ToCV p22 interacts with NbBAG5 to inhibit autophagy to regulate viral infection.


Subject(s)
Crinivirus , Nicotiana , Plant Proteins , Viral Proteins , Autophagy , Crinivirus/metabolism , Plant Diseases , Nicotiana/virology , Plant Proteins/metabolism , Viral Proteins/metabolism
14.
J Mol Biol ; 434(24): 167873, 2022 12 30.
Article in English | MEDLINE | ID: mdl-36328231

ABSTRACT

We have investigated whether the presence of the origin of assembly sequence (OAS) of tobacco mosaic virus (TMV) is necessary for the specific encapsidation of replicating viral RNA. To this end TMV coat protein was expressed from replicating RNA constructs with or without the OAS in planta. In both cases the replicating RNA was specifically encapsidated to give nucleoprotein nanorods, though the yield in the absence of the OAS was reduced to about 60% of that in its presence. Moreover, the nanorods generated in the absence of the OAS were more heterogeneous in length and contained frequent structural discontinuities. These results strongly suggest that the function of the OAS is to provide a unique site for the initiation of viral assembly, leading to a one-start helix, rather than the selection of virus RNA for packaging.


Subject(s)
RNA, Viral , Tobacco Mosaic Virus , Virus Assembly , RNA, Viral/metabolism , Nicotiana/virology , Tobacco Mosaic Virus/genetics , Tobacco Mosaic Virus/physiology , Virus Assembly/genetics , RNA Replication , Base Sequence , Nanotubes
15.
New Phytol ; 235(4): 1543-1557, 2022 08.
Article in English | MEDLINE | ID: mdl-35524450

ABSTRACT

A gene upregulated in Nicotiana benthamiana after Bamboo mosaic virus (BaMV) infection was revealed as 1-deoxy-d-xylulose-5-phosphate reductoisomerase (NbDXR). DXR is the key enzyme in the 2-C-methyl-d-erythritol-4-phosphate (MEP) pathway that catalyzes the conversion of 1-deoxy-d-xylulose 5-phosphate to 2-C-methyl-d-erythritol-4-phosphate. Knockdown and overexpression of NbDXR followed by BaMV inoculation revealed that NbDXR is involved in BaMV accumulation. Treating leaves with fosmidomycin, an inhibitor of DXR function, reduced BaMV accumulation. Subcellular localization confirmed that DXR is a chloroplast-localized protein by confocal microscopy. Furthermore, knockdown of 1-hydroxy-2-methyl-2-(E)-butenyl-4-diphosphate reductase, one of the enzymes in the MEP pathway, also reduced BaMV accumulation. The accumulation of BaMV increased significantly in protoplasts treated with isopentenyl pyrophosphate. Thus, the metabolites of the MEP pathway could be involved in BaMV infection. To identify the critical components involved in BaMV accumulation, we knocked down the crucial enzyme of isoprenoid synthesis, NbGGPPS11 or NbGGPPS2. Only NbGGPPS2 was involved in BaMV infection. The geranylgeranyl pyrophosphate (GGPP) synthesized by NbGGPPS2 is known for gibberellin synthesis. We confirmed this result by supplying gibberellic acid exogenously on leaves, which increased BaMV accumulation. The de novo synthesis of gibberellic acid could assist BaMV accumulation.


Subject(s)
Gibberellins , Nicotiana/virology , Potexvirus , Erythritol/analogs & derivatives , Erythritol/biosynthesis , Gibberellins/metabolism , Potexvirus/physiology , Sugar Phosphates/biosynthesis , Nicotiana/metabolism
16.
Nat Commun ; 13(1): 575, 2022 01 31.
Article in English | MEDLINE | ID: mdl-35102164

ABSTRACT

DNA methylation is an epigenetic mechanism that plays important roles in gene regulation and transposon silencing. Active DNA demethylation has evolved to counterbalance DNA methylation at many endogenous loci. Here, we report that active DNA demethylation also targets viral DNAs, tomato yellow leaf curl China virus (TYLCCNV) and its satellite tomato yellow leaf curl China betasatellite (TYLCCNB), to promote their virulence. We demonstrate that the ßC1 protein, encoded by TYLCCNB, interacts with a ROS1-like DNA glycosylase in Nicotiana benthamiana and with the DEMETER (DME) DNA glycosylase in Arabidopsis thaliana. The interaction between ßC1 and DME facilitates the DNA glycosylase activity to decrease viral DNA methylation and promote viral virulence. These findings reveal that active DNA demethylation can be regulated by a viral protein to subvert DNA methylation-mediated defense.


Subject(s)
Begomovirus/pathogenicity , DNA Glycosylases/metabolism , DNA Methylation/genetics , Host-Pathogen Interactions/genetics , Arabidopsis/virology , DNA, Viral/metabolism , Plant Diseases/virology , Plant Proteins/metabolism , Protein Binding , Satellite Viruses/pathogenicity , Nicotiana/virology , Viral Proteins/metabolism , Virulence
17.
Nat Commun ; 13(1): 716, 2022 02 07.
Article in English | MEDLINE | ID: mdl-35132090

ABSTRACT

Mitogen-activated protein kinase (MAPK) cascades play an important role in innate immunity against various pathogens in plants and animals. However, we know very little about the importance of MAPK cascades in plant defense against viral pathogens. Here, we used a positive-strand RNA necrovirus, beet black scorch virus (BBSV), as a model to investigate the relationship between MAPK signaling and virus infection. Our findings showed that BBSV infection activates MAPK signaling, whereas viral coat protein (CP) counteracts MAPKKKα-mediated antiviral defense. CP does not directly target MAPKKKα, instead it competitively interferes with the binding of 14-3-3a to MAPKKKα in a dose-dependent manner. This results in the instability of MAPKKKα and subversion of MAPKKKα-mediated antiviral defense. Considering the conservation of 14-3-3-binding sites in the CPs of diverse plant viruses, we provide evidence that 14-3-3-MAPKKKα defense signaling module is a target of viral effectors in the ongoing arms race of defense and viral counter-defense.


Subject(s)
14-3-3 Proteins/immunology , Capsid Proteins/immunology , MAP Kinase Kinase Kinases/immunology , Plant Immunity/genetics , Tombusviridae/pathogenicity , 14-3-3 Proteins/genetics , Cell Death , Gene Expression Regulation, Plant , Host-Pathogen Interactions , Immune Evasion , MAP Kinase Kinase Kinases/genetics , MAP Kinase Signaling System , Plant Diseases/genetics , Plant Diseases/immunology , Plant Diseases/virology , Plant Leaves/genetics , Plant Leaves/immunology , Plant Leaves/virology , Protein Binding , Nicotiana/genetics , Nicotiana/immunology , Nicotiana/virology , Tombusviridae/classification , Tombusviridae/metabolism
18.
Viruses ; 14(2)2022 01 24.
Article in English | MEDLINE | ID: mdl-35215816

ABSTRACT

Alphasatellites, which encode only a replication-associated protein (alpha-Rep), are frequently found to be non-essential satellite components associated with begomovirus/betasatellite complexes, and their presence can modulate disease symptoms and/or viral DNA accumulation during infection. Our previous study has shown that there are three types of alphasatellites associated with begomovirus/betasatellite complexes in Yunnan province in China and they encode three corresponding types of alpha-Rep proteins. However, the biological functions of alpha-Reps remain poorly understood. In this study, we investigated the biological functions of alpha-Reps in post-transcriptional gene silencing (PTGS) and transcriptional gene silencing (TGS) using 16c and 16-TGS transgenic Nicotiana benthamiana plants. Results showed that all the three types of alpha-Rep proteins were capable of suppressing the PTGS and reversing the TGS. Among them, the alpha-Rep of Y10DNA1 has the strongest PTGS and TGS suppressor activities. We also found that the alpha-Rep proteins were able to increase the accumulation of their helper virus during coinfection. These results suggest that the alpha-Reps may have a role in overcoming host defense, which provides a possible explanation for the selective advantage provided by the association of alphasatellites with begomovirus/betasatellite complexes.


Subject(s)
Begomovirus/metabolism , Plant Diseases/virology , Satellite Viruses/metabolism , Viral Proteins/metabolism , Amino Acid Sequence , Begomovirus/chemistry , Begomovirus/genetics , China , Plants, Genetically Modified/genetics , Plants, Genetically Modified/virology , Satellite Viruses/chemistry , Satellite Viruses/genetics , Sequence Alignment , Nicotiana/genetics , Nicotiana/virology , Viral Proteins/chemistry , Viral Proteins/genetics
19.
Viruses ; 14(2)2022 02 08.
Article in English | MEDLINE | ID: mdl-35215936

ABSTRACT

Soybean is a major legume crop that plays an important role in food production, industrial production, and animal husbandry. Here, we characterize a novel soybean-infecting monopartite geminivirus identified in China. Analysis of the contigs de novo assembled from sequenced small interfering RNAs, followed by PCR, cloning, and sequencing, the complete viral genome was determined to be 2782 nucleotides. The genome contains the conserved nonanucleotide sequence, TAATATTAC and other sequence features typical of the family Geminiviridae, and encodes two and four open reading frames in the virion-sense and the complementary-sense strands, respectively. Genome-wide pairwise identity analysis revealed that the novel virus shares less than 65.6% identity with previously characterized geminiviruses. Phylogenetic and recombination analysis indicated that this virus was placed in a unique taxon within the family Geminiviridae and potentially arose from recombination. An infectious clone of this virus was further constructed and its infectivity was tested in different species of plants. Successful infection and characteristic symptoms were observed in Glycine max, Nicotiana benthamiana, N. tabacum, N. glutinosa, and N. tabacum cv. Samsun plants. Taken together, this virus represents a member of an unclassified genus of the family Geminiviridae, for which the name soybean yellow leaf curl virus is proposed.


Subject(s)
Geminiviridae/genetics , Geminiviridae/pathogenicity , Plant Diseases/virology , Base Sequence , China , Geminiviridae/classification , Geminiviridae/isolation & purification , Genome, Viral , Phylogeny , Recombination, Genetic , Glycine max/virology , Nicotiana/virology , Virulence
20.
Int J Mol Sci ; 23(4)2022 Feb 09.
Article in English | MEDLINE | ID: mdl-35216065

ABSTRACT

P0 proteins encoded by poleroviruses Brassica yellows virus (BrYV) and Potato leafroll virus (PLRV) are viral suppressors of RNA silencing (VSR) involved in abolishing host RNA silencing to assist viral infection. However, other roles that P0 proteins play in virus infection remain unclear. Here, we found that C-terminal truncation of P0 resulted in compromised systemic infection of BrYV and PLRV. C-terminal truncation affected systemic but not local VSR activities of P0 proteins, but neither transient nor ectopic stably expressed VSR proteins could rescue the systemic infection of BrYV and PLRV mutants. Moreover, BrYV mutant failed to establish systemic infection in DCL2/4 RNAi or RDR6 RNAi plants, indicating that systemic infection might be independent of the VSR activity of P0. Partially rescued infection of BrYV mutant by the co-infected PLRV implied the functional conservation of P0 proteins within genus. However, although C-terminal truncation mutant of BrYV P0 showed weaker interaction with its movement protein (MP) when compared to wild-type P0, wild-type and mutant PLRV P0 showed similar interaction with its MP. In sum, our findings revealed the role of P0 in virus systemic infection and the requirement of P0 carboxyl terminal region for the infection.


Subject(s)
Luteoviridae/genetics , Luteoviridae/pathogenicity , Myelin P0 Protein/genetics , Viral Proteins/genetics , Brassica/virology , Mutation/genetics , Plant Diseases/virology , Plant Proteins/genetics , RNA Interference/physiology , Nicotiana/virology
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